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SRX733218: Fungal amplicons from leaf litter: Sample August.G16RXX
1 LS454 (454 GS FLX Titanium) run: 6,748 spots, 3.3M bases, 1.9Mb downloads

Design: Fungal specific primers LROR and LR5 amplified genomic DNA
Submitted by: University of California, Irvine
Study: Leaf litter Targeted Locus (Loci)
show Abstracthide Abstract
Microbes such as Bacteria and Fungi play a critical role in the degradation of organic matter. Different combinations of microbial taxa result in different rates of decomposition, so predicting how climate change will affect microbial composition and function is fundamental to understanding future environments. However, the high number of microbial species in any given location constrains our ability to predict the fate of individuals following disturbance such as climate change. Here we present the results of a long-term manipulation experiment in which replicated grassland plots were subjected to drought and nitrogen fertilization within the range of predicted future conditions. We show that increases and decreases of leaf-litter microbes caused by global change simulations were significantly patterned by phylogenetic relatedness, resulting in communities more closely related than a random selection process would predict.
Sample: Phylo_patterns_Loma_ridge_leaf_litter
SAMN02744972 • SRS604513 • All experiments • All runs
Library:
Name: August.New.G16RXX
Instrument: 454 GS FLX Titanium
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Spot descriptor:
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Runs: 1 run, 6,748 spots, 3.3M bases, 1.9Mb
Run# of Spots# of BasesSizePublished
SRR16128736,7483.3M1.9Mb2015-10-15

ID:
1060077

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